MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Streptococcus sp.
19428wA2_WM07
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 396
bases: 1,818,681 bps
CDS: 1,634
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 50
misc RNA:
Total features: 1,691
Total number of protein coding genes annotated/found:
1,634
Display
20
50
100
All items per page
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 82 pages
Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5048|JADGLN010000038.1
SEQF5048_00958
Genome Viewer
NA
AA
636/212
10515-11150
Thiamine pyrophosphokinase
SEQF5048|JADGLN010000038.1
SEQF5048_00959
Genome Viewer
NA
AA
1251/417
11153-12403
hypothetical protein
SEQF5048|JADGLN010000038.1
SEQF5048_00960
Genome Viewer
NA
AA
945/315
12393-13337
3'-5' exoribonuclease YhaM
SEQF5048|JADGLN010000038.1
SEQF5048_00961
Genome Viewer
NA
AA
837/279
13413-14249
Pur operon repressor
SEQF5048|JADGLN010000038.1
SEQF5048_00962
Genome Viewer
NA
AA
579/193
14246-14824
hypothetical protein
SEQF5048|JADGLN010000038.1
SEQF5048_00963
Genome Viewer
NA
AA
414/138
15045-15458
30S ribosomal protein S12
SEQF5048|JADGLN010000038.1
SEQF5048_00964
Genome Viewer
NA
AA
471/157
15477-15947
30S ribosomal protein S7
SEQF5048|JADGLN010000038.1
SEQF5048_00965
Genome Viewer
NA
AA
2079/693
16160-18238
Elongation factor G
SEQF5048|JADGLN010000166.1
SEQF5048_00227
Genome Viewer
NA
AA
327/109
16-342
IS630 family transposase ISStso1
SEQF5048|JADGLN010000014.1
SEQF5048_00158
Genome Viewer
NA
AA
873/291
1036-164
hypothetical protein
SEQF5048|JADGLN010000014.1
SEQF5048_00159
Genome Viewer
NA
AA
936/312
2038-1103
putative manganese-dependent inorganic pyrophosphatase
SEQF5048|JADGLN010000014.1
SEQF5048_00160
Genome Viewer
NA
AA
795/265
2910-2116
Pyruvate formate-lyase 1-activating enzyme
SEQF5048|JADGLN010000014.1
SEQF5048_00161
Genome Viewer
NA
AA
1350/450
4371-3022
hypothetical protein
SEQF5048|JADGLN010000014.1
SEQF5048_00162
Genome Viewer
NA
AA
1140/380
5601-4462
hypothetical protein
SEQF5048|JADGLN010000014.1
SEQF5048_00163
Genome Viewer
NA
AA
531/177
6148-5618
hypothetical protein
SEQF5048|JADGLN010000014.1
SEQF5048_00164
Genome Viewer
NA
AA
417/139
6566-6150
hypothetical protein
SEQF5048|JADGLN010000014.1
SEQF5048_00165
Genome Viewer
NA
AA
384/128
6942-6559
hypothetical protein
SEQF5048|JADGLN010000014.1
SEQF5048_00166
Genome Viewer
NA
AA
738/246
7051-7788
Putative peptidyl-prolyl cis-trans isomerase
SEQF5048|JADGLN010000014.1
SEQF5048_00167
Genome Viewer
NA
AA
927/309
7956-8882
Oxidoreductase YdhF
SEQF5048|JADGLN010000014.1
SEQF5048_00168
Genome Viewer
NA
AA
210/70
9168-8959
hypothetical protein
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 82 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by